satijalab / seurat
R toolkit for single cell genomics
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R toolkit for single cell genomics
An implementation of the Grammar of Graphics in R
R for data science: a book
Telco Customer ChurnRate Analysis
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Simple Features for R
R toolkit for the analysis of single-cell chromatin data
R's data.table package extends data.frame:
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Repository for Programming Assignment 2 for R Programming on Coursera
dplyr: A grammar of data manipulation
Easily generate information-rich, publication-quality tables from R
Accurate sample inference from amplicon data with single nucleotide resolution
Community-provided extensions to Seurat
Make Complex Heatmaps
tools for the analysis of color data in R
R package for performing 2-sample MR using MR-Base database
Inferring CNV from Single-Cell RNA-Seq
Install R packages from GitHub, GitLab, Bitbucket, git, svn repositories, URLs
renv: Project environments for R.
R package for detecting doublets in single-cell RNA sequencing data
igraph R package
Tools to make an R developer's life easier
R Interface to Python
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)